That's the problem....
If the cells share a common electrolyte, then the current (or some of it at least) will leak between cells. If we have current leakage, then it's not going to be very efficient (or as efficient as it can be). To get maximum efficiency, you must have each cell totally electrically isolated from one another.
Unfortunately, I'm sure we all wish it was that easy
As of yet, we pretty much have to fill each one separately.